First of all, doing a VTEC swap on a long-geared non-VTEC trans is flushing your money down the toilet. What's the point? Given the choice, I'd take the VTEC trans and the non-VTEC engine. Gearing is everything on a Honda.
Secondly, LS/VTEC is highly overrated. It's just a bad idea overall. Most people do it thinking it's a cheap way to get VTEC. What you end up with is a compromised engine, a long geared tranny, and a block that still has the LS's redline but now you're using a VTEC ECU that allows you the higher redline. Recipe for disaster. Recipe for disappointment.
You're much better off just getting a complete GSR swap. Or better yet, get a GSR or B16 transmission for your LS motor and then turbo the LS. In fact, the latter suggestion makes more sense each time I suggest it. VTEC is great and all but it's not the end-all for making power on a Honda. VTEC broadens the power band but you know what else... so does a turbo.
I own a stock GSR with a Type R trans cuz I'm becoming and old family man and that's what I'm into now. But if it was ten years ago, I'd have a B16 or GSR or Type R trans on an LS turbo with turbo app cams and cam gears tuned on a dyno. You will laugh at VTEC all day and all night. Take that from a GSR owner.
I personally don't place any trust in a Honda motor that's been opened up.I don't even trust myself to get it right. I stick with low mile JDM motors that may cost a little more upfront, but they last forever. Everyone who takes the cheap way ends up with no money and no motor. These motors have to be done exactly by the book. Everything torqued to spec, new head bolts, torqued in steps, resurfaced surfaces etc etc. Honda rice mechanics cut corners like nobody's business. Race shops treat them just like any other motor thinking they know everything but other motors are much more forgiving. (Chalk it up to Hondas tight tolerances. It doesn't reflect negatively on the brand.) Also, race shops hold disdain for the Honda crowd. So they give you a motor, you run it a few times, and then it starts running funny, and then it rattles itself apart.
That's LS/VTEC for you. Do a poll here and see how many people have LS/VTEC's.